Esophageal atresia

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ORPHA:1199OMIM:189960Q39.1Q39.0
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1FDA treatments9Active trials50Specialists8Treatment centers

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UniteRare data is sourced from FDA.gov, ClinicalTrials.gov, Orphanet, OMIM, and NORD.
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Overview

Esophageal atresia (EA) is a congenital malformation in which the esophagus (the tube that connects the mouth to the stomach) fails to develop as a continuous passage. Instead, the esophagus ends in a blind pouch, preventing food and saliva from reaching the stomach normally. In the majority of cases (approximately 85%), esophageal atresia occurs together with a tracheoesophageal fistula (TEF), an abnormal connection between the esophagus and the trachea (windpipe). This condition is typically detected at birth or shortly thereafter when the newborn presents with excessive drooling, choking, coughing, and cyanosis (bluish skin discoloration) during the first feeding attempt. Inability to pass a nasogastric tube into the stomach is a classic diagnostic finding. Esophageal atresia primarily affects the gastrointestinal and respiratory systems. Approximately 50% of affected infants have additional associated anomalies, most commonly as part of the VACTERL association, which includes vertebral defects, anorectal malformations, cardiac defects, tracheoesophageal fistula, renal anomalies, and limb abnormalities. Cardiac anomalies are the most common associated malformations and are a significant determinant of prognosis. Other associated conditions may include chromosomal abnormalities such as trisomy 18 or trisomy 21. The primary treatment for esophageal atresia is surgical repair, ideally performed within the first few days of life. The standard procedure involves closing the tracheoesophageal fistula (if present) and performing a primary anastomosis to reconnect the two ends of the esophagus. In cases of long-gap esophageal atresia, where the distance between the esophageal segments is too great for primary repair, delayed repair techniques or esophageal replacement procedures (using stomach, colon, or jejunum) may be necessary. Survival rates have improved dramatically with advances in neonatal surgery and intensive care, now exceeding 90% in infants without severe associated anomalies. Long-term complications may include gastroesophageal reflux, esophageal stricture, dysphagia, tracheomalacia, and recurrent respiratory infections, requiring ongoing multidisciplinary follow-up.

Also known as:

Clinical phenotype terms— hover any for plain English:

Gastrointestinal dysmotilityHP:0002579Excessive salivationHP:0003781Chronic pulmonary obstructionHP:0006510Absence of stomach bubble on fetal sonographyHP:0010963BronchitisHP:0012387Oral aversionHP:0012523Immunologic hypersensitivityHP:0100326EsophagitisHP:0100633
Inheritance

Multifactorial

Caused by a mix of several genes and environmental factors

Age of Onset

Neonatal

Begins at or shortly after birth (first 4 weeks)

Orphanet ↗OMIM ↗NORD ↗

FDA & Trial Timeline

10 events
Dec 2026The Use of Cultured (Dermal) Epithelial Autografts in Severely Burned Patients

University Children's Hospital, Zurich

TrialNOT YET RECRUITING
Mar 2026A Study to Investigate CEA-PRIT 2.0 in Participants With Metastatic Colorectal Cancer (mCRC)

Hoffmann-La Roche — PHASE1

TrialNOT YET RECRUITING
Feb 2026Neoadjuvant CAPEOX Versus Upfront Surgery for Locally Advanced Colon Cancer With Elevated CEA: A Single-Center, Open-Label, Randomized Controlled Trial

Sun Yat-sen University — NA

TrialNOT YET RECRUITING
Feb 2026Dual-Target CAR-NK Cells for Biomarker-Selected Advanced Colorectal Cancer

Beijing Biotech — PHASE1, PHASE2

TrialRECRUITING
Dec 2025Phase II Study of LM-24C5

LaNova Medicines Limited — PHASE2

TrialRECRUITING
Nov 2025CEA CAR-T Therapy After Cytoreduction in Colorectal Cancer Patients With Peritoneal Metastases

Second Affiliated Hospital, School of Medicine, Zhejiang University — PHASE1

TrialRECRUITING
Nov 2025Brazilian Multicenter Study on Esophageal Atresia

University of Sao Paulo General Hospital

TrialNOT YET RECRUITING
Oct 2025Place Activation in Urban Peripheries: the 'Comunidades y Espacios Activos" Project (CEA)

University of Texas at Austin — NA

TrialRECRUITING
Sep 2025Predictive Value of CEA and ctDNA in Lung Cancer Recurrence

Guangdong Provincial People's Hospital

TrialNOT YET RECRUITING
Sep 2025CEA-Targeted CAR-T Therapy in CEA-Positive Advanced Solid Tumors

Chongqing Precision Biotech Co., Ltd — PHASE1

TrialRECRUITING

Data sourced from FDA regulatory filings and ClinicalTrials.gov. Updated periodically.

Treatments

1 available

Ethamolin

Ethanolamine oleate· QOL Medical

indicated for the treatment of patients with esophageal varices that have recently bled, to prevent rebleeding

Clinical Trials

9 recruitingView all trials with filters →
N/A4 trials
Primary Posterior Tracheopexy Prevents Tracheal Collapse
N/A
Enrolling by Invitation
PI: John Vlot, MD, PhD (Erasmus Medical Center) · Sites: Rotterdam; Utrecht +1 more
Dumping Syndrome and Esophageal Atresia
N/A
Actively Recruiting
PI: Madelaine AUMAR, MD (University Hospital, Lille) · Sites: Lille; Lille
Transanastomotic Tube for Proximal Esophageal Atresia With Distal Tracheoesophageal Fistula Repair
N/A
Active
PI: Justin Lee, MD (Phoenix Children's Hospital) · Sites: Phoenix, Arizona; Los Angeles, California +8 more
Use of Indocyanine Green During Primary Repair of Oesophageal Atresia and Distal Tracheo-oesophageal Fistula
N/A
Actively Recruiting
PI: Max Pachl (Birmingham Women's and Children's NHS Foundation T) · Sites: Birmingham · Age: 01 yrs
Other5 trials
Study of the Effect of the Time of Diagnosis (Antenatal vs. Postnatal) on the Post-traumatic Reactions of Parents of Children Undergoing Oesophageal Atresia Surgery "
Actively Recruiting
PI: Véronique Debarge, MD,PhD (University Hospital, Lille) · Sites: Lille · Age: 1899 yrs
Symptoms, Pulmonary Function, Muscle Strength, Exercise Capacity, and Frailty in Esophageal Atresia vs. Healthy Peers
Actively Recruiting
PI: Deniz Inal-Ince, PhD, PT (Hacettepe University) · Sites: Ankara, Ankara · Age: 618 yrs
Management of Esophageal Atresia With Right Aortic Arch: Is the Side of Approach Important?
Actively Recruiting
· Sites: Nice
Long Term Outcome of Easophageal Atresia : Transmics Profiles in Adolescence
Actively Recruiting
· Sites: Lille, Nord; Amiens +31 more · Age: 1314 yrs
Prospective Evaluation of the Results of Multidisciplinary Follow-up After a Transitional Consultation for Esophageal Atresia
Actively Recruiting
· Sites: Paris · Age: 1830 yrs

Specialists

Showing 25 of 50View all specialists →
IM
Ismail Songul, MD
Specialist
PI on 1 active trial1 Esophageal atresia publication
EP
Elif Kocaaga, MSc, PT
Specialist
PI on 1 active trial
DP
Deniz Inal-Ince, PhD, PT
Specialist
PI on 1 active trial
MM
Meltem Yildiz-Kayaoglu, MD
Specialist
PI on 1 active trial
CC
cecilia curvale
Specialist
PI on 1 active trial
MM
Madelaine AUMAR, MD
Specialist
PI on 1 active trial
AP
Agostino Pierro, Prof
Specialist
PI on 1 active trial
SP
SELEN SEREL ARSLAN, PhD
Specialist
PI on 1 active trial
MP
Max Pachl
Specialist
PI on 3 active trials1 Esophageal atresia publication
SD
S.N. de Wildt, Prof. Dr.
Specialist
PI on 1 active trial
AP
Ajay Goel, PhD
ROME, NY
Specialist
PI on 7 active trials
ES
Elisa Severi
Specialist
PI on 1 active trial1 Esophageal atresia publication
SM
Steven Rosenberg, M.D.
Specialist
PI on 4 active trials
DP
Dirk J. Grünhagen, MD, PhD
Specialist
PI on 2 active trials
VM
Véronique Debarge, MD,PhD
Specialist
PI on 1 active trial
PH
Pearl Houghteling
PALO ALTO, CA
Specialist
PI on 1 active trial
DM
David Relman, MD
PALO ALTO, CA
Specialist
PI on 1 active trial
LM
Laurence WEISS, MD
Specialist
PI on 2 active trials1 Esophageal atresia publication
SD
Savita V Dandapani
DUARTE, CA
Specialist
PI on 2 active trials
JW
Jeffrey Y Wong
Specialist
PI on 6 active trials110 Esophageal atresia publications
HM
Hoyoung Maeng, M.D.
FRAMINGHAM, MA
Specialist
PI on 2 active trials

Treatment Centers

8 centers
🏥 NORD

Baylor College of Medicine Rare Disease Center

Baylor College of Medicine

📍 Houston, TX

🏥 NORD

Stanford Medicine Rare Disease Center

Stanford Medicine

📍 Stanford, CA

🔬 UDN

NIH Clinical Center Undiagnosed Diseases Program

National Institutes of Health

📍 Bethesda, MD

🔬 UDN

UCLA UDN Clinical Site

UCLA Health

📍 Los Angeles, CA

🔬 UDN

Baylor College of Medicine UDN Clinical Site

Baylor College of Medicine

📍 Houston, TX

🔬 UDN

Harvard/MGH UDN Clinical Site

Massachusetts General Hospital

📍 Boston, MA

🏥 NORD

Mayo Clinic Center for Individualized Medicine

Mayo Clinic

📍 Rochester, MN

👤 Mayo Clinic Center for Individualized Medicine

🏥 NORD

UCLA Rare Disease Day Program

UCLA Health

📍 Los Angeles, CA

Travel Grants

No travel grants are currently matched to Esophageal atresia.

Search all travel grants →NORD Financial Assistance ↗

Community

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Latest news about Esophageal atresia

Disease timeline:

New recruiting trial: Anti-CEA CAR-T Cells to Treat Colorectal Liver Metastases

A new clinical trial is recruiting patients for Esophageal atresia

New recruiting trial: Clinical Study on Chimeric Antigen Receptor T Lymphocyte (CAR-T) Targeting CEA for the Treatment of CEA - Positive Advanced Lung Cancer

A new clinical trial is recruiting patients for Esophageal atresia

New recruiting trial: Ga-68-FAPI-46 PET for CRC Recurrence Detection in Elevated CEA

A new clinical trial is recruiting patients for Esophageal atresia

New recruiting trial: CEA Targeting Chimeric Antigen Receptor T Lymphocytes (CAR-T) in the Treatment of CEA Positive Advanced Solid Tumors

A new clinical trial is recruiting patients for Esophageal atresia

New recruiting trial: Place Activation in Urban Peripheries: the 'Comunidades y Espacios Activos" Project (CEA)

A new clinical trial is recruiting patients for Esophageal atresia

New recruiting trial: Correlation Between Carotid Stump Pressure and Interhemispheric rSO₂ Asymmetry During Awake Carotid Endarterectomy

A new clinical trial is recruiting patients for Esophageal atresia

New recruiting trial: Urgent Carotid Endarterectomy (CEA) Versus Delayed CEA in Symptomatic Carotid Stenosis (SPREAD-STACI II)

A new clinical trial is recruiting patients for Esophageal atresia

New recruiting trial: CEA CAR-T Therapy After Cytoreduction in Colorectal Cancer Patients With Peritoneal Metastases

A new clinical trial is recruiting patients for Esophageal atresia

New recruiting trial: Anti-CEA CAR-T for Advanced CEA-Positive Lung Carcinoma

A new clinical trial is recruiting patients for Esophageal atresia

New recruiting trial: Dynamic Multi-omics Integration Model to Predict Neoadjuvant Therapy Response in Locally Advanced Rectal Cancer

A new clinical trial is recruiting patients for Esophageal atresia

Caregiver Resources

NORD Caregiver Resources

Support, advocacy, and financial assistance for caregivers of rare disease patients.

Mental Health Support

Rare disease caregiving can be isolating. Connect with counseling and peer support.

Family & Caregiver Grants

Financial assistance programs specifically for caregivers of rare disease patients.

Social Security Disability

Learn how rare disease patients may qualify for SSDI/SSI benefits.

Common questions about Esophageal atresia

What is Esophageal atresia?

Esophageal atresia (EA) is a congenital malformation in which the esophagus (the tube that connects the mouth to the stomach) fails to develop as a continuous passage. Instead, the esophagus ends in a blind pouch, preventing food and saliva from reaching the stomach normally. In the majority of cases (approximately 85%), esophageal atresia occurs together with a tracheoesophageal fistula (TEF), an abnormal connection between the esophagus and the trachea (windpipe). This condition is typically detected at birth or shortly thereafter when the newborn presents with excessive drooling, choking, c

How is Esophageal atresia inherited?

Esophageal atresia follows a multifactorial inheritance pattern. Genetic counseling can help families understand recurrence risk and testing options.

At what age does Esophageal atresia typically begin?

Typical onset of Esophageal atresia is neonatal. Age of onset can vary across affected individuals.

Are there clinical trials for Esophageal atresia?

Yes — 9 recruiting clinical trials are currently listed for Esophageal atresia on UniteRare. See the clinical trials section on this page for phase, sponsor, and site details sourced from ClinicalTrials.gov.

Which specialists treat Esophageal atresia?

25 specialists and care centers treating Esophageal atresia are listed on UniteRare, sourced from ClinicalTrials.gov principal investigators, published research, and the NPPES NPI registry.