Overview
Congenital intrinsic factor deficiency (also known as hereditary intrinsic factor deficiency or congenital pernicious anemia) is a rare inherited disorder characterized by the absence or dysfunction of gastric intrinsic factor (IF), a glycoprotein produced by parietal cells of the stomach that is essential for the absorption of vitamin B12 (cobalamin) in the terminal ileum. Without functional intrinsic factor, vitamin B12 cannot be adequately absorbed, leading to severe vitamin B12 deficiency despite normal dietary intake. The disease primarily affects the hematologic and nervous systems. Patients typically present in early childhood, usually between the ages of 1 and 5 years, with megaloblastic anemia — characterized by fatigue, pallor, weakness, failure to thrive, and irritability. Neurological manifestations may develop if the condition is left untreated and can include developmental delay, hypotonia, peripheral neuropathy, and subacute combined degeneration of the spinal cord. Unlike autoimmune pernicious anemia seen in adults, congenital intrinsic factor deficiency is not associated with gastric atrophy or anti-intrinsic factor antibodies, and gastric acid secretion remains normal. The condition is caused by pathogenic variants in the GIF gene (encoding gastric intrinsic factor) and follows an autosomal recessive inheritance pattern. Diagnosis is established through laboratory findings of low serum vitamin B12, megaloblastic anemia, normal gastric histology, and absence of anti-intrinsic factor or anti-parietal cell antibodies, confirmed by molecular genetic testing. Treatment consists of lifelong parenteral (intramuscular) vitamin B12 injections, which effectively correct the anemia and prevent neurological complications. With early diagnosis and consistent treatment, patients can expect a normal quality of life.
Also known as:
Clinical phenotype terms— hover any for plain English:
Autosomal recessive
Passed on when both parents carry the same gene change; often skips generations
Childhood
Begins in childhood, roughly ages 1 to 12
FDA & Trial Timeline
3 eventsInstitute of Hematology & Blood Diseases Hospital, China
Institute of Hematology & Blood Diseases Hospital, China
Sichuan Provincial People's Hospital
Data sourced from FDA regulatory filings and ClinicalTrials.gov. Updated periodically.
Treatments
1 availableLeucovorin calcium
Leucovorin calcium is indicated in the treatment of megaloblastic anemias due to folic acid deficiency when oral therapy is not feasible
Clinical Trials
View all trials with filters →No actively recruiting trials found for Congenital intrinsic factor deficiency at this time.
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Treatment Centers
8 centersBaylor College of Medicine Rare Disease Center ↗
Baylor College of Medicine
📍 Houston, TX
🏥 NORDStanford Medicine Rare Disease Center ↗
Stanford Medicine
📍 Stanford, CA
🔬 UDNNIH Clinical Center Undiagnosed Diseases Program ↗
National Institutes of Health
📍 Bethesda, MD
🔬 UDNUCLA UDN Clinical Site ↗
UCLA Health
📍 Los Angeles, CA
🔬 UDNBaylor College of Medicine UDN Clinical Site ↗
Baylor College of Medicine
📍 Houston, TX
🔬 UDNHarvard/MGH UDN Clinical Site ↗
Massachusetts General Hospital
📍 Boston, MA
🏥 NORDMayo Clinic Center for Individualized Medicine ↗
Mayo Clinic
📍 Rochester, MN
👤 Mayo Clinic Center for Individualized Medicine
🏥 NORDUCLA Rare Disease Day Program ↗
UCLA Health
📍 Los Angeles, CA
Travel Grants
No travel grants are currently matched to Congenital intrinsic factor deficiency.
Community
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Start the conversation →Latest news about Congenital intrinsic factor deficiency
Disease timeline:
New recruiting trial: A Real-world Prospective Observational Study on the Efficacy and Safety of L-AmB(Liposomal Amphotericin B) for br- IFD(Breakthrough Invasive Fungal Disease) in Children and Adolescent Patients With Hematological Malignancies Receiving Triazoles or Echinocandins Prophylaxis
A new clinical trial is recruiting patients for Congenital intrinsic factor deficiency
New recruiting trial: Liposomal Amphotericin B and Isavuconazole/Posaconazole in Br-IFD( Breakthrough Invasive Fungal Disease) in Patients With Malignant Hematological Diseases
A new clinical trial is recruiting patients for Congenital intrinsic factor deficiency
Caregiver Resources
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Social Security Disability
Learn how rare disease patients may qualify for SSDI/SSI benefits.
Common questions about Congenital intrinsic factor deficiency
What is Congenital intrinsic factor deficiency?
Congenital intrinsic factor deficiency (also known as hereditary intrinsic factor deficiency or congenital pernicious anemia) is a rare inherited disorder characterized by the absence or dysfunction of gastric intrinsic factor (IF), a glycoprotein produced by parietal cells of the stomach that is essential for the absorption of vitamin B12 (cobalamin) in the terminal ileum. Without functional intrinsic factor, vitamin B12 cannot be adequately absorbed, leading to severe vitamin B12 deficiency despite normal dietary intake. The disease primarily affects the hematologic and nervous systems. Pat
How is Congenital intrinsic factor deficiency inherited?
Congenital intrinsic factor deficiency follows a autosomal recessive inheritance pattern. Genetic counseling can help families understand recurrence risk and testing options.
At what age does Congenital intrinsic factor deficiency typically begin?
Typical onset of Congenital intrinsic factor deficiency is childhood. Age of onset can vary across affected individuals.
Which specialists treat Congenital intrinsic factor deficiency?
1 specialists and care centers treating Congenital intrinsic factor deficiency are listed on UniteRare, sourced from ClinicalTrials.gov principal investigators, published research, and the NPPES NPI registry.