Overview
Cystinuria is an inherited metabolic disorder characterized by defective reabsorption of the amino acid cystine (and the dibasic amino acids ornithine, lysine, and arginine) in the proximal renal tubule and the gastrointestinal tract. This leads to excessive urinary excretion of cystine, which is poorly soluble in urine, resulting in the formation of recurrent cystine kidney stones (nephrolithiasis). Cystinuria is one of the most common inherited causes of kidney stones and is caused by pathogenic variants in the SLC3A1 gene (type A) or the SLC7A9 gene (type B). The condition primarily affects the urinary system, including the kidneys, ureters, and bladder. Patients typically present with recurrent renal colic (severe flank pain), urinary tract infections, hematuria (blood in the urine), and in some cases, obstructive uropathy that can lead to chronic kidney disease if inadequately managed. Cystine stones are often large, bilateral, and may form staghorn calculi. The age of onset is variable, but many patients experience their first stone episode in childhood or adolescence, with some presenting as early as infancy. Males tend to be more severely affected than females. Treatment focuses on reducing urinary cystine concentration and increasing cystine solubility. First-line management includes high fluid intake (to maintain dilute urine, typically exceeding 3 liters per day in adults), dietary sodium restriction, urinary alkalinization with potassium citrate to maintain urine pH above 7.0, and dietary moderation of animal protein. When conservative measures are insufficient, thiol-binding drugs such as D-penicillamine or tiopronin (alpha-mercaptopropionylglycine) are used to form more soluble cysteine-drug complexes. Captopril has also been used, though evidence for its efficacy is limited. Surgical intervention, including extracorporeal shock wave lithotripsy (ESWL), ureteroscopy, or percutaneous nephrolithotomy, may be necessary for stone removal, though cystine stones are often resistant to ESWL. Lifelong monitoring and treatment adherence are essential to prevent recurrent stone formation and preserve kidney function.
Also known as:
Clinical phenotype terms— hover any for plain English:
Autosomal recessive
Passed on when both parents carry the same gene change; often skips generations
Variable
Can begin at different ages, from infancy through adulthood
FDA & Trial Timeline
2 eventsIndiana Kidney Stone Institute — NA
Data sourced from FDA regulatory filings and ClinicalTrials.gov. Updated periodically.
Treatments
1 availablePenicillamine
indicated in the treatment of cystinuria
Treatment Centers
8 centersBaylor College of Medicine Rare Disease Center ↗
Baylor College of Medicine
📍 Houston, TX
🏥 NORDStanford Medicine Rare Disease Center ↗
Stanford Medicine
📍 Stanford, CA
🔬 UDNNIH Clinical Center Undiagnosed Diseases Program ↗
National Institutes of Health
📍 Bethesda, MD
🔬 UDNUCLA UDN Clinical Site ↗
UCLA Health
📍 Los Angeles, CA
🔬 UDNBaylor College of Medicine UDN Clinical Site ↗
Baylor College of Medicine
📍 Houston, TX
🔬 UDNHarvard/MGH UDN Clinical Site ↗
Massachusetts General Hospital
📍 Boston, MA
🏥 NORDMayo Clinic Center for Individualized Medicine ↗
Mayo Clinic
📍 Rochester, MN
👤 Mayo Clinic Center for Individualized Medicine
🏥 NORDUCLA Rare Disease Day Program ↗
UCLA Health
📍 Los Angeles, CA
Financial Resources
2 resourcesTiopronin
Travere
Cystinuria
Thiola
Travere Therapeutics
Cystinuria
Travel Grants
No travel grants are currently matched to Cystinuria.
Community
No community posts yet. Be the first to share your experience with Cystinuria.
Start the conversation →Latest news about Cystinuria
No recent news articles for Cystinuria.
Follow this condition to be notified when news becomes available.
Caregiver Resources
NORD Caregiver Resources
Support, advocacy, and financial assistance for caregivers of rare disease patients.
Mental Health Support
Rare disease caregiving can be isolating. Connect with counseling and peer support.
Family & Caregiver Grants
Financial assistance programs specifically for caregivers of rare disease patients.
Social Security Disability
Learn how rare disease patients may qualify for SSDI/SSI benefits.
Common questions about Cystinuria
What is Cystinuria?
Cystinuria is an inherited metabolic disorder characterized by defective reabsorption of the amino acid cystine (and the dibasic amino acids ornithine, lysine, and arginine) in the proximal renal tubule and the gastrointestinal tract. This leads to excessive urinary excretion of cystine, which is poorly soluble in urine, resulting in the formation of recurrent cystine kidney stones (nephrolithiasis). Cystinuria is one of the most common inherited causes of kidney stones and is caused by pathogenic variants in the SLC3A1 gene (type A) or the SLC7A9 gene (type B). The condition primarily affects
How is Cystinuria inherited?
Cystinuria follows a autosomal recessive inheritance pattern. Genetic counseling can help families understand recurrence risk and testing options.
Are there clinical trials for Cystinuria?
Yes — 2 recruiting clinical trials are currently listed for Cystinuria on UniteRare. See the clinical trials section on this page for phase, sponsor, and site details sourced from ClinicalTrials.gov.
Which specialists treat Cystinuria?
25 specialists and care centers treating Cystinuria are listed on UniteRare, sourced from ClinicalTrials.gov principal investigators, published research, and the NPPES NPI registry.
What treatment and support options exist for Cystinuria?
2 patient support programs are currently tracked on UniteRare for Cystinuria. See the treatments and support programs sections for copay assistance, eligibility, and contact details.