Pyruvate dehydrogenase E3-binding protein deficiency

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ORPHA:255182OMIM:245349E74.4
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Overview

Pyruvate dehydrogenase E3-binding protein deficiency (also known as component X deficiency or dihydrolipoamide dehydrogenase-binding protein deficiency) is a rare inherited metabolic disorder caused by mutations in the PDHX gene (previously known as DLDBP), which encodes the E3-binding protein (E3BP, formerly called protein X) of the pyruvate dehydrogenase complex (PDC). The E3-binding protein is essential for anchoring the E3 (dihydrolipoamide dehydrogenase) component to the PDC core, and its deficiency leads to impaired conversion of pyruvate to acetyl-CoA. This results in energy deficiency, particularly affecting tissues with high energy demands such as the brain and nervous system, and leads to accumulation of lactic acid in the blood. Clinical features typically present in infancy or early childhood and include lactic acidosis, developmental delay, intellectual disability, hypotonia, seizures, and structural brain abnormalities. Neuroimaging may reveal abnormalities of the corpus callosum, basal ganglia, or white matter changes resembling Leigh syndrome. The severity of the condition is variable, ranging from severe neonatal lactic acidosis to milder forms with predominantly neurological involvement. Some patients may exhibit episodic metabolic decompensation triggered by illness or metabolic stress. Treatment is largely supportive and aimed at managing metabolic acidosis and optimizing residual PDC activity. A ketogenic diet, which provides an alternative energy source (ketone bodies) that bypasses the PDC, is a mainstay of dietary management. Thiamine (vitamin B1) supplementation may be trialed, as some PDC deficiencies show partial thiamine responsiveness, though the response in E3BP deficiency specifically is variable. Dichloroacetate has been used in some cases to reduce lactate levels by stimulating PDC activity. Despite these interventions, neurological outcomes remain guarded, and long-term prognosis depends on the severity of the enzymatic deficiency and the degree of neurological involvement.

Also known as:

Clinical phenotype terms— hover any for plain English:

Increased CSF lactateHP:0002490Abnormal CSF pyruvate family amino acid concentrationHP:0500231Spastic diplegiaHP:0001264TetraparesisHP:0002273Decreased activity of the pyruvate dehydrogenase complexHP:0002928Abnormal circulating pyruvate family amino acid concentrationHP:0010915Abnormal basal ganglia morphologyHP:0002134Periventricular cystsHP:0007109
Inheritance

Autosomal recessive

Passed on when both parents carry the same gene change; often skips generations

Age of Onset

Variable

Can begin at different ages, from infancy through adulthood

Orphanet ↗OMIM ↗NORD ↗

Treatments

No FDA-approved treatments are currently listed for Pyruvate dehydrogenase E3-binding protein deficiency.

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No specialists are currently listed for Pyruvate dehydrogenase E3-binding protein deficiency.

View NORD Rare Disease Centers ↗Undiagnosed Disease Network ↗

Treatment Centers

8 centers
🏥 NORD

Baylor College of Medicine Rare Disease Center

Baylor College of Medicine

📍 Houston, TX

🏥 NORD

Stanford Medicine Rare Disease Center

Stanford Medicine

📍 Stanford, CA

🔬 UDN

NIH Clinical Center Undiagnosed Diseases Program

National Institutes of Health

📍 Bethesda, MD

🔬 UDN

UCLA UDN Clinical Site

UCLA Health

📍 Los Angeles, CA

🔬 UDN

Baylor College of Medicine UDN Clinical Site

Baylor College of Medicine

📍 Houston, TX

🔬 UDN

Harvard/MGH UDN Clinical Site

Massachusetts General Hospital

📍 Boston, MA

🏥 NORD

Mayo Clinic Center for Individualized Medicine

Mayo Clinic

📍 Rochester, MN

👤 Mayo Clinic Center for Individualized Medicine

🏥 NORD

UCLA Rare Disease Day Program

UCLA Health

📍 Los Angeles, CA

Travel Grants

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Common questions about Pyruvate dehydrogenase E3-binding protein deficiency

What is Pyruvate dehydrogenase E3-binding protein deficiency?

Pyruvate dehydrogenase E3-binding protein deficiency (also known as component X deficiency or dihydrolipoamide dehydrogenase-binding protein deficiency) is a rare inherited metabolic disorder caused by mutations in the PDHX gene (previously known as DLDBP), which encodes the E3-binding protein (E3BP, formerly called protein X) of the pyruvate dehydrogenase complex (PDC). The E3-binding protein is essential for anchoring the E3 (dihydrolipoamide dehydrogenase) component to the PDC core, and its deficiency leads to impaired conversion of pyruvate to acetyl-CoA. This results in energy deficiency,

How is Pyruvate dehydrogenase E3-binding protein deficiency inherited?

Pyruvate dehydrogenase E3-binding protein deficiency follows a autosomal recessive inheritance pattern. Genetic counseling can help families understand recurrence risk and testing options.