Overview
Kleefstra syndrome due to a point mutation (also known as Kleefstra syndrome 1, or EHMT1-related Kleefstra syndrome caused by intragenic mutation) is a rare genetic neurodevelopmental disorder caused by heterozygous loss-of-function point mutations in the EHMT1 gene (euchromatic histone methyltransferase 1) located on chromosome 9q34.3. While Kleefstra syndrome is more commonly caused by a microdeletion of the 9q34.3 region, a subset of patients carry intragenic point mutations in EHMT1 that produce a clinically similar phenotype. The EHMT1 gene encodes a histone methyltransferase involved in epigenetic regulation of gene expression, and its haploinsufficiency leads to widespread developmental consequences. The syndrome primarily affects the central nervous system, musculoskeletal system, and craniofacial structures. Core clinical features include moderate to severe intellectual disability, childhood hypotonia (low muscle tone), significant speech and language delay, and a characteristic facial appearance that may include microcephaly, midface hypoplasia, hypertelorism, synophrys, everted lower lip, and a protruding tongue. Behavioral features are common and may include autism spectrum disorder, apathy or periods of regression, sleep disturbances, and mood disorders, particularly in adolescence and adulthood. Congenital heart defects, renal and urological anomalies, epilepsy, and hearing impairment may also occur. Some patients experience a behavioral regression phenotype in adulthood characterized by extreme apathy, catatonia-like features, and loss of previously acquired skills. There is currently no cure or disease-specific treatment for Kleefstra syndrome. Management is supportive and multidisciplinary, involving early intervention programs, speech and occupational therapy, behavioral support, and monitoring for associated medical complications such as cardiac defects, seizures, and sleep apnea. Psychiatric symptoms and behavioral regression may require careful pharmacological management. Regular follow-up with neurology, cardiology, and developmental specialists is recommended.
Clinical phenotype terms— hover any for plain English:
Autosomal dominant
Passed on from just one parent; each child has about a 50% chance of inheriting it
Neonatal
Begins at or shortly after birth (first 4 weeks)
Treatments
No FDA-approved treatments are currently listed for Kleefstra syndrome due to a point mutation.
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Specialists
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Treatment Centers
8 centersBaylor College of Medicine Rare Disease Center ↗
Baylor College of Medicine
📍 Houston, TX
🏥 NORDStanford Medicine Rare Disease Center ↗
Stanford Medicine
📍 Stanford, CA
🔬 UDNNIH Clinical Center Undiagnosed Diseases Program ↗
National Institutes of Health
📍 Bethesda, MD
🔬 UDNUCLA UDN Clinical Site ↗
UCLA Health
📍 Los Angeles, CA
🔬 UDNBaylor College of Medicine UDN Clinical Site ↗
Baylor College of Medicine
📍 Houston, TX
🔬 UDNHarvard/MGH UDN Clinical Site ↗
Massachusetts General Hospital
📍 Boston, MA
🏥 NORDMayo Clinic Center for Individualized Medicine ↗
Mayo Clinic
📍 Rochester, MN
👤 Mayo Clinic Center for Individualized Medicine
🏥 NORDUCLA Rare Disease Day Program ↗
UCLA Health
📍 Los Angeles, CA
Travel Grants
No travel grants are currently matched to Kleefstra syndrome due to a point mutation.
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Common questions about Kleefstra syndrome due to a point mutation
What is Kleefstra syndrome due to a point mutation?
Kleefstra syndrome due to a point mutation (also known as Kleefstra syndrome 1, or EHMT1-related Kleefstra syndrome caused by intragenic mutation) is a rare genetic neurodevelopmental disorder caused by heterozygous loss-of-function point mutations in the EHMT1 gene (euchromatic histone methyltransferase 1) located on chromosome 9q34.3. While Kleefstra syndrome is more commonly caused by a microdeletion of the 9q34.3 region, a subset of patients carry intragenic point mutations in EHMT1 that produce a clinically similar phenotype. The EHMT1 gene encodes a histone methyltransferase involved in
How is Kleefstra syndrome due to a point mutation inherited?
Kleefstra syndrome due to a point mutation follows a autosomal dominant inheritance pattern. Genetic counseling can help families understand recurrence risk and testing options.
At what age does Kleefstra syndrome due to a point mutation typically begin?
Typical onset of Kleefstra syndrome due to a point mutation is neonatal. Age of onset can vary across affected individuals.