Overview
Congenital hypothalamic hamartoma syndrome, also known as Pallister-Hall syndrome (PHS), is a rare genetic disorder characterized by the presence of a hypothalamic hamartoma (a benign tumor-like malformation in the hypothalamus region of the brain) along with a spectrum of additional congenital anomalies. The condition affects multiple body systems, most notably the central nervous system, the skeletal system, and the endocrine system. Key clinical features include hypothalamic hamartoma, which may cause gelastic (laughing) seizures or precocious puberty, polydactyly (extra fingers or toes, often central or postaxial), bifid epiglottis or other airway anomalies, imperforate anus, and pituitary dysfunction that can lead to panhypopituitarism. Some patients may also have renal abnormalities and genital malformations. The severity of Pallister-Hall syndrome is highly variable, ranging from mild forms with polydactyly and a small asymptomatic hamartoma to severe, life-threatening presentations in neonates with large hamartomas, airway compromise, and significant endocrine deficiency. The syndrome is caused by pathogenic variants in the GLI3 gene, which plays a critical role in embryonic development through the Hedgehog signaling pathway. Diagnosis is typically based on clinical findings and confirmed through molecular genetic testing. Treatment is supportive and symptom-directed. Endocrine deficiencies, particularly hypopituitarism, require hormone replacement therapy. Seizures may be managed with antiepileptic medications, and in some cases, surgical intervention for the hypothalamic hamartoma may be considered. Surgical correction may also be needed for imperforate anus, airway anomalies, or significant polydactyly. Prognosis depends on the severity of the malformations, with milder cases having a generally favorable outcome. Genetic counseling is recommended for affected families.
Also known as:
Autosomal dominant
Passed on from just one parent; each child has about a 50% chance of inheriting it
Neonatal
Begins at or shortly after birth (first 4 weeks)
FDA & Trial Timeline
1 eventInSightec — NA
Data sourced from FDA regulatory filings and ClinicalTrials.gov. Updated periodically.
Treatments
No FDA-approved treatments are currently listed for Congenital hypothalamic hamartoma syndrome.
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Rare Disease Specialist
Treatment Centers
8 centersBaylor College of Medicine Rare Disease Center ↗
Baylor College of Medicine
📍 Houston, TX
🏥 NORDStanford Medicine Rare Disease Center ↗
Stanford Medicine
📍 Stanford, CA
🔬 UDNNIH Clinical Center Undiagnosed Diseases Program ↗
National Institutes of Health
📍 Bethesda, MD
🔬 UDNUCLA UDN Clinical Site ↗
UCLA Health
📍 Los Angeles, CA
🔬 UDNBaylor College of Medicine UDN Clinical Site ↗
Baylor College of Medicine
📍 Houston, TX
🔬 UDNHarvard/MGH UDN Clinical Site ↗
Massachusetts General Hospital
📍 Boston, MA
🏥 NORDMayo Clinic Center for Individualized Medicine ↗
Mayo Clinic
📍 Rochester, MN
👤 Mayo Clinic Center for Individualized Medicine
🏥 NORDUCLA Rare Disease Day Program ↗
UCLA Health
📍 Los Angeles, CA
Travel Grants
No travel grants are currently matched to Congenital hypothalamic hamartoma syndrome.
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Disease timeline:
New recruiting trial: A Feasibility Safety Study of Benign Centrally-Located Intracranial Tumors in Pediatric and Young Adult Subjects
A new clinical trial is recruiting patients for Congenital hypothalamic hamartoma syndrome
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Common questions about Congenital hypothalamic hamartoma syndrome
What is Congenital hypothalamic hamartoma syndrome?
Congenital hypothalamic hamartoma syndrome, also known as Pallister-Hall syndrome (PHS), is a rare genetic disorder characterized by the presence of a hypothalamic hamartoma (a benign tumor-like malformation in the hypothalamus region of the brain) along with a spectrum of additional congenital anomalies. The condition affects multiple body systems, most notably the central nervous system, the skeletal system, and the endocrine system. Key clinical features include hypothalamic hamartoma, which may cause gelastic (laughing) seizures or precocious puberty, polydactyly (extra fingers or toes, of
How is Congenital hypothalamic hamartoma syndrome inherited?
Congenital hypothalamic hamartoma syndrome follows a autosomal dominant inheritance pattern. Genetic counseling can help families understand recurrence risk and testing options.
At what age does Congenital hypothalamic hamartoma syndrome typically begin?
Typical onset of Congenital hypothalamic hamartoma syndrome is neonatal. Age of onset can vary across affected individuals.
Which specialists treat Congenital hypothalamic hamartoma syndrome?
5 specialists and care centers treating Congenital hypothalamic hamartoma syndrome are listed on UniteRare, sourced from ClinicalTrials.gov principal investigators, published research, and the NPPES NPI registry.