Combined immunodeficiency due to partial RAG1 deficiency

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ORPHA:231154OMIM:609889D81.8
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Overview

Combined immunodeficiency due to partial RAG1 deficiency is a rare primary immunodeficiency disorder caused by hypomorphic (partial loss-of-function) mutations in the RAG1 gene. RAG1 (Recombination Activating Gene 1) encodes a protein essential for V(D)J recombination, the process by which T cells and B cells generate diverse antigen receptors. Unlike complete RAG1 deficiency, which causes severe combined immunodeficiency (SCID) with absent T and B cells, partial RAG1 deficiency allows some residual recombinase activity, resulting in reduced but not completely absent T and B lymphocyte development. This condition is also referred to as Omenn syndrome-like phenotype or leaky SCID when associated with partial RAG1 function, depending on the clinical presentation. Patients typically present in infancy or early childhood with recurrent and severe infections, including bacterial, viral, and opportunistic infections. The immune system is significantly compromised, with low numbers of T and B lymphocytes and impaired antibody production (hypogammaglobulinemia). Some patients may develop features of immune dysregulation, including autoimmune cytopenias, granulomatous disease, and lymphoproliferation. The clinical spectrum is broad, ranging from presentations resembling Omenn syndrome (with erythroderma, eosinophilia, elevated IgE, and lymphadenopathy) to milder combined immunodeficiency with later onset. Management depends on the severity of the immunodeficiency. Supportive care includes immunoglobulin replacement therapy, prophylactic antimicrobials, and aggressive treatment of infections. Hematopoietic stem cell transplantation (HSCT) is the definitive curative treatment and is recommended for patients with severe disease. Gene therapy approaches are under investigation. Early diagnosis through newborn screening programs that detect T-cell receptor excision circles (TRECs) has improved outcomes by enabling earlier intervention. Without treatment, patients are at significant risk of life-threatening infections and complications from immune dysregulation.

Also known as:

Clinical phenotype terms— hover any for plain English:

Autoimmune hemolytic anemiaHP:0001890Autoimmune neutropeniaHP:0001904Severe combined immunodeficiencyHP:0004430Decreased total T cell countHP:0005403Interstitial pneumonitisHP:0006515Decreased total B cell countHP:0010976
Inheritance

Autosomal recessive

Passed on when both parents carry the same gene change; often skips generations

Age of Onset

Variable

Can begin at different ages, from infancy through adulthood

Orphanet ↗OMIM ↗NORD ↗

Treatments

No FDA-approved treatments are currently listed for Combined immunodeficiency due to partial RAG1 deficiency.

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No specialists are currently listed for Combined immunodeficiency due to partial RAG1 deficiency.

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Treatment Centers

8 centers
🏥 NORD

Baylor College of Medicine Rare Disease Center

Baylor College of Medicine

📍 Houston, TX

🏥 NORD

Stanford Medicine Rare Disease Center

Stanford Medicine

📍 Stanford, CA

🔬 UDN

NIH Clinical Center Undiagnosed Diseases Program

National Institutes of Health

📍 Bethesda, MD

🔬 UDN

UCLA UDN Clinical Site

UCLA Health

📍 Los Angeles, CA

🔬 UDN

Baylor College of Medicine UDN Clinical Site

Baylor College of Medicine

📍 Houston, TX

🔬 UDN

Harvard/MGH UDN Clinical Site

Massachusetts General Hospital

📍 Boston, MA

🏥 NORD

Mayo Clinic Center for Individualized Medicine

Mayo Clinic

📍 Rochester, MN

👤 Mayo Clinic Center for Individualized Medicine

🏥 NORD

UCLA Rare Disease Day Program

UCLA Health

📍 Los Angeles, CA

Travel Grants

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Common questions about Combined immunodeficiency due to partial RAG1 deficiency

What is Combined immunodeficiency due to partial RAG1 deficiency?

Combined immunodeficiency due to partial RAG1 deficiency is a rare primary immunodeficiency disorder caused by hypomorphic (partial loss-of-function) mutations in the RAG1 gene. RAG1 (Recombination Activating Gene 1) encodes a protein essential for V(D)J recombination, the process by which T cells and B cells generate diverse antigen receptors. Unlike complete RAG1 deficiency, which causes severe combined immunodeficiency (SCID) with absent T and B cells, partial RAG1 deficiency allows some residual recombinase activity, resulting in reduced but not completely absent T and B lymphocyte develop

How is Combined immunodeficiency due to partial RAG1 deficiency inherited?

Combined immunodeficiency due to partial RAG1 deficiency follows a autosomal recessive inheritance pattern. Genetic counseling can help families understand recurrence risk and testing options.