Overview
1q44 microdeletion syndrome (also known as monosomy 1q44 or chromosome 1q44 deletion syndrome; Orphanet code 238769) is a rare chromosomal disorder caused by a submicroscopic deletion on the long arm of chromosome 1 at band q44. This deletion typically involves the loss of several genes, including HNRNPU, FAM36A, and SMYD3, among others. The syndrome primarily affects the nervous system and is characterized by intellectual disability of variable severity, seizures (often presenting as infantile-onset epilepsy), and significant speech and language delay. Microcephaly (abnormally small head size) is a hallmark feature and reflects underlying abnormalities in brain development. Corpus callosum abnormalities, including agenesis or hypoplasia, are frequently observed on brain imaging. Additional clinical features may include facial dysmorphisms such as a round face, flat nasal bridge, widely spaced eyes (hypertelorism), thin upper lip, and low-set ears. Growth delay and short stature may also be present. Some individuals exhibit hypotonia (low muscle tone) in infancy, which can affect feeding and motor development. Behavioral difficulties, including features of autism spectrum disorder, have been reported in some patients. The size of the deletion can vary between individuals, which contributes to the variability in clinical presentation. The HNRNPU gene has been identified as a critical gene within this region, particularly associated with seizures and intellectual disability. Most cases arise as de novo (new) deletions, meaning they are not inherited from a parent. Diagnosis is typically made through chromosomal microarray analysis (array CGH). There is no cure for 1q44 microdeletion syndrome; management is supportive and symptomatic, including antiepileptic medications for seizure control, speech therapy, physical therapy, occupational therapy, and early intervention programs to optimize developmental outcomes.
Also known as:
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Sporadic
Usually appears on its own, not inherited from a parent
Neonatal
Begins at or shortly after birth (first 4 weeks)
Treatments
No FDA-approved treatments are currently listed for 1q44 microdeletion syndrome.
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Treatment Centers
8 centersBaylor College of Medicine Rare Disease Center ↗
Baylor College of Medicine
📍 Houston, TX
🏥 NORDStanford Medicine Rare Disease Center ↗
Stanford Medicine
📍 Stanford, CA
🔬 UDNNIH Clinical Center Undiagnosed Diseases Program ↗
National Institutes of Health
📍 Bethesda, MD
🔬 UDNUCLA UDN Clinical Site ↗
UCLA Health
📍 Los Angeles, CA
🔬 UDNBaylor College of Medicine UDN Clinical Site ↗
Baylor College of Medicine
📍 Houston, TX
🔬 UDNHarvard/MGH UDN Clinical Site ↗
Massachusetts General Hospital
📍 Boston, MA
🏥 NORDMayo Clinic Center for Individualized Medicine ↗
Mayo Clinic
📍 Rochester, MN
👤 Mayo Clinic Center for Individualized Medicine
🏥 NORDUCLA Rare Disease Day Program ↗
UCLA Health
📍 Los Angeles, CA
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Common questions about 1q44 microdeletion syndrome
What is 1q44 microdeletion syndrome?
1q44 microdeletion syndrome (also known as monosomy 1q44 or chromosome 1q44 deletion syndrome; Orphanet code 238769) is a rare chromosomal disorder caused by a submicroscopic deletion on the long arm of chromosome 1 at band q44. This deletion typically involves the loss of several genes, including HNRNPU, FAM36A, and SMYD3, among others. The syndrome primarily affects the nervous system and is characterized by intellectual disability of variable severity, seizures (often presenting as infantile-onset epilepsy), and significant speech and language delay. Microcephaly (abnormally small head size
How is 1q44 microdeletion syndrome inherited?
1q44 microdeletion syndrome follows a sporadic inheritance pattern. Genetic counseling can help families understand recurrence risk and testing options.
At what age does 1q44 microdeletion syndrome typically begin?
Typical onset of 1q44 microdeletion syndrome is neonatal. Age of onset can vary across affected individuals.